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Accel-NGS 2S DNA library kits citations

Johnson, J.G., Spurbeck, R.R., Sandhu, S.K. and Matson, J.S. (2014a). Genome Sequence of Klebsiella pneumoniae Respiratory Isolate IA565. Genome Announcements, [online] 2(5). Available at: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4161749/ [Accessed 13 Nov. 2019].

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Bolognesi, C., Forcato, C., Buson, G., Fontana, F., Mangano, C., Doffini, A., Sero, V., Lanzellotto, R., Signorini, G., Calanca, A., Sergio, M., Romano, R., Gianni, S., Medoro, G., Giorgini, G., Morreau, H., Barberis, M., Corver, W.E. and Manaresi, N. (2016). Digital Sorting of Pure Cell Populations Enables Unambiguous Genetic Analysis of Heterogeneous Formalin-Fixed Paraffin-Embedded Tumors by Next Generation Sequencing. Scientific Reports, [online] 6(1). Available at: https://www.nature.com/articles/srep20944 [Accessed 13 Nov. 2019].

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Gremel, G., Lee, R.J., Girotti, M.R., Mandal, A.K., Valpione, S., Garner, G., Ayub, M., Wood, S., Rothwell, D.G., Fusi, A., Wallace, A., Brady, G., Dive, C., Dhomen, N., Lorigan, P. and Marais, R. (2016). Distinct subclonal tumour responses to therapy revealed by circulating cell-free DNA. Annals of Oncology, [online] 27(10), pp.1959–1965. Available at: https://academic.oup.com/annonc/article/27/10/1959/2389057 [Accessed 13 Nov. 2019].

Ricci, D.P., Melfi, M.D., Lasker, K., Dill, D.L., McAdams, H.H. and Shapiro, L. (2016). Cell cycle progression inCaulobacterrequires a nucleoid-associated protein with high AT sequence recognition. Proceedings of the National Academy of Sciences, [online] 113(40), pp.E5952–E5961. Available at: http://www.pnas.org/content/113/40/E5952.abstract [Accessed 13 Nov. 2019].

Sundaram, A.Y.M., Hughes, T., Biondi, S., Bolduc, N., Bowman, S.K., Camilli, A., Chew, Y.C., Couture, C., Farmer, A., Jerome, J.P., Lazinski, D.W., McUsic, A., Peng, X., Shazand, K., Xu, F., Lyle, R. and Gilfillan, G.D. (2016). A comparative study of ChIP-seq sequencing library preparation methods. BMC Genomics, [online] 17(1). Available at: https://bit.ly/34Vv61F [Accessed 13 Nov. 2019].

Williamson, S.C., Metcalf, R.L., Trapani, F., Mohan, S., Antonello, J., Abbott, B., Leong, H.S., Chester, C.P.E., Simms, N., Polanski, R., Nonaka, D., Priest, L., Fusi, A., Carlsson, F., Carlsson, A., Hendrix, M.J.C., Seftor, R.E.B., Seftor, E.A., Rothwell, D.G., Hughes, A., Hicks, J., Miller, C., Kuhn, P., Brady, G., Simpson, K.L., Blackhall, F.H. and Dive, C. (2016). Vasculogenic mimicry in small cell lung cancer. Nature Communications, [online] 7(1). Available at: https://www.nature.com/articles/ncomms13322 [Accessed 13 Nov. 2019].

Baranzoni, G.M., Fratamico, P.M., Kim, G.-H., Reichenberger, E.R., Funk, J.A., Manning, S.D. and Bosilevac, J.M. (2017). Genome Sequences of 34 Shiga Toxin-Producing Escherichia coli Isolates from Swine and Other Sources. Genome Announcements, [online] 5(44). Available at: http://genomea.asm.org/content/5/44/e01214-17.full.pdf+html [Accessed 13 Nov. 2019].

Dong, X., Zhang, L., Milholland, B., Lee, M., Maslov, A.Y., Wang, T. and Vijg, J. (2017). Accurate identification of single-nucleotide variants in whole-genome-amplified single cells. Nature Methods, [online] 14(5), pp.491–493. Available at: https://www.nature.com/articles/nmeth.4227 [Accessed 13 Nov. 2019].

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Milholland, B., Dong, X., Zhang, L., Hao, X., Suh, Y. and Vijg, J. (2017). Differences between germline and somatic mutation rates in humans and mice. Nature Communications, [online] 8(1). Available at: https://www.nature.com/articles/ncomms15183.pdf [Accessed 13 Nov. 2019].

Cavalcanti, G.S., Shukla, P., Morris, M., Ribeiro, B., Foley, M., Doane, M.P., Thompson, C.C., Edwards, M.S., Dinsdale, E.A. and Thompson, F.L. (2018). Rhodoliths holobionts in a changing ocean: host-microbes interactions mediate coralline algae resilience under ocean acidification. BMC Genomics, [online] 19(1). Available at: https://bmcgenomics.biomedcentral.com/articles/10.1186/s12864-018-5064-4 [Accessed 13 Nov. 2019].

Gan, H., Serra-Cardona, A., Hua, X., Zhou, H., Labib, K., Yu, C. and Zhang, Z. (2018). The Mcm2-Ctf4-Polα Axis Facilitates Parental Histone H3-H4 Transfer to Lagging Strands. Molecular Cell, [online] 72(1), pp.140-151.e3. Available at: https://www.sciencedirect.com/science/article/pii/S1097276518307408 [Accessed 13 Nov. 2019].

Khanshour, A.M., Kou, I., Fan, Y., Einarsdottir, E., Makki, N., Kidane, Y.H., Kere, J., Grauers, A., Johnson, T.A., Paria, N., Patel, C., Singhania, R., Kamiya, N., Takeda, K., Otomo, N., Watanabe, K., Luk, K.D.K., Cheung, K.M.C., Herring, J.A., Rios, J.J., Ahituv, N., Gerdhem, P., Gurnett, C.A., Song, Y.-Q., Ikegawa, S. and Wise, C.A. (2018). Genome-wide meta-analysis and replication studies in multiple ethnicities identify novel adolescent idiopathic scoliosis susceptibility loci. Human Molecular Genetics, [online] 27(22), pp.3986–3998. Available at: https://academic.oup.com/hmg/advance-article-abstract/doi/10.1093/hmg/ddy306/5079034?redirectedFrom=fulltext [Accessed 13 Nov. 2019].

Ma, S., Hsieh, Y.-P., Ma, J. and Lu, C. (2018). Low-input and multiplexed microfluidic assay reveals epigenomic variation across cerebellum and prefrontal cortex. Science Advances, [online] 4(4), p.eaar8187. Available at: http://advances.sciencemag.org/content/4/4/eaar8187 [Accessed 13 Nov. 2019].

Parker, H., Carr, L., Syeda, S., Bryant, D. and Strefford, J.C. (2018). Characterization of Somatically-Acquired Copy Number Alterations in Chronic Lymphocytic Leukaemia Using Shallow Whole Genome Sequencing. Methods in Molecular Biology, [online] pp.327–353. Available at: https://link.springer.com/protocol/10.1007/978-1-4939-8876-1_23#citeas [Accessed 13 Nov. 2019].

Scheper, W., Kelderman, S., Fanchi, L.F., Linnemann, C., Bendle, G., de Rooij, M.A.J., Hirt, C., Mezzadra, R., Slagter, M., Dijkstra, K., Kluin, R.J.C., Snaebjornsson, P., Milne, K., Nelson, B.H., Zijlmans, H., Kenter, G., Voest, E.E., Haanen, J.B.A.G. and Schumacher, T.N. (2018). Low and variable tumor reactivity of the intratumoral TCR repertoire in human cancers. Nature Medicine, [online] 25(1), pp.89–94. Available at: https://www.nature.com/articles/s41591-018-0266-5 [Accessed 13 Nov. 2019].

Seehawer, M., Heinzmann, F., D’Artista, L., Harbig, J., Roux, P.-F., Hoenicke, L., Dang, H., Klotz, S., Robinson, L., Doré, G., Rozenblum, N., Kang, T.-W., Chawla, R., Buch, T., Vucur, M., Roth, M., Zuber, J., Luedde, T., Sipos, B., Longerich, T., Heikenwälder, M., Wang, X.W., Bischof, O. and Zender, L. (2018). Necroptosis microenvironment directs lineage commitment in liver cancer. Nature, [online] 562(7725), pp.69–75. Available at: https://www.nature.com/articles/s41586-018-0519-y [Accessed 13 Nov. 2019].

Wylie, K.M., Wylie, T.N., Buller, R., Herter, B., Cannella, M.T. and Storch, G.A. (2018). Detection of Viruses in Clinical Samples by Use of Metagenomic Sequencing and Targeted Sequence Capture. Journal of Clinical Microbiology, [online] 56(12). Available at: https://jcm.asm.org/content/early/2018/09/14/JCM.01123-18 [Accessed 13 Nov. 2019].

Xing, J. (2018). Epigenetic Profiling of Active Enhancers in Mouse Retinal Ganglion Cells. [online] OpenCommons@UConn. Available at: https://opencommons.uconn.edu/gs_theses/1268/ [Accessed 13 Nov. 2019].

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Genga, R.M.J., Kernfeld, E.M., Parsi, K.M., Parsons, T.J., Ziller, M.J. and Maehr, R. (2019). Single-Cell RNA-Sequencing-Based CRISPRi Screening Resolves Molecular Drivers of Early Human Endoderm Development. Cell Reports, [online] 27(3), pp.708-718.e10. Available at: https://www.sciencedirect.com/science/article/pii/S2211124719304061 [Accessed 13 Nov. 2019].

Grace, H.E., Galdun, P., Lesnefsky, E.J., West, F.D. and Iyer, S. (2019). mRNA Reprogramming of T8993G Leigh’s Syndrome Fibroblast Cells to Create Induced Pluripotent Stem Cell Models for Mitochondrial Disorders. Stem Cells and Development, [online] 28(13), pp.846–859. Available at: https://www.liebertpub.com/doi/abs/10.1089/scd.2019.0045 [Accessed 13 Nov. 2019].

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