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Long-read PCR Amplicon kit: LoopSeq

The LoopSeq™ PCR Amplicon kit permits accurate full-length sequencing of any 1-3 kb PCR product on Illumina® sequencers, without the need for extra hardware. Using a set of enzymes to propagate a barcode intra-molecularly through any piece of DNA or RNA, the LoopSeq kits use a simple, single tube workflow to eliminate PCR and GC bias as molecules are labelled in the first step and only sequenced/reported once. This general purpose long-range PCR sequencing kit is suitable for a wide range of applications including human leukocyte antigen (HLA) testing, pre-natal screening, oncology, mutagenesis detection, CRISPR, phage and synthetic biology.

Benefits of using the LoopSeq Long-read PCR Amplicon kit
• Sequence individual long amplicons
• Sequence pools of long amplicons
• Highly accurate abundance measurements
• Fast multiplexed workflow

LoopSeq workflow

LoopSeq workflow

1. Get the kit
2. Upload results - securely upload FASTQ results to Loop's cloud pipeline
3. Receive data - download FASTQ and CSV files with classification and quantification data 

LoopSeq steps

Assay time 8.5 hours
Hands-on time 2.5 hours
Mechanism of action Synthetic long-read sequencing
Multiplexing Allows for 24 samples to be processed in one tube
Input quantity 10 ng genomic DNA (2 ng/µl)
Category Any linear dsDNA input
Sytem compatibility HiSeq® 2500, HiSeq® 3000, HiSeq® 4000, NextSeq®, NovaSeq®, MiSeq®, MiniSeq®
Nucleic acid type DNA
Method 2 x 150 Paired End (PE) sequencing
Specialised sample types PCR products, genomes, metagenomes, synthetic DNA libraries, viruses
Technology Assembly of synthetic long-reads from short-reads
Automation capability Yes


Material available for download
LoopSeq PCR Amplicon quick start guide
LoopSeq PCR Amplicon user manual

Illumina, HiSeq, NextSeq, MiSeq, NovaSeq, MiniSeq and TruSeq are registered trademarks of Illumina, Inc.

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